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Peptide record

TPDB11337

Antibacterial Antifungal standard
32 amino acids
Basic Information
3D PDB MODEL
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TPDB11337
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 32-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
GILDTFKGVAKGVAKDLAVHMLEKLKCKMTGC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C150H258N40O41S4
RNQPSWY
K
3406.18
9.59
7
3
14
+3
0.35
0.287
97.50
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
125
0.04
4
Residue Composition
number
3
A
0
R
0
N
2
D
2
C
1
E
0
Q
4
G
1
H
1
I
4
L
6
K
2
M
1
F
0
P
0
S
2
T
0
W
0
Y
3
V
Amino Acid Distribution
A: 3 R: 0 N: 0 D: 2 C: 2 E: 1 Q: 0 G: 4 H: 1 I: 1 L: 4 K: 6 M: 2 F: 1 P: 0 S: 0 T: 2 W: 0 Y: 0 V: 3
Chemical Descriptors
32 reviewed residue count
C150H258N40O41S4 sequence-only estimate (linear, free termini)
3406.18 sequence-only estimate (linear, free termini)
9.59 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.35 sequence-only estimate (linear, free termini)
0.287 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb