Back to search

Peptide record

TPDB11293

Antibacterial Antifungal standard
31 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB11293
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 31-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
NFYEIFRNRNRGGLIKDAATPWLPCEILRPC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C165H256N48O43S2
QHMSV
R
3664.26
9.06
5
3
12
+2
2.08
-0.397
81.94
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
7115
1.94
7
Residue Composition
number
2
A
4
R
3
N
1
D
2
C
2
E
0
Q
2
G
0
H
3
I
3
L
1
K
0
M
2
F
3
P
0
S
1
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 2 R: 4 N: 3 D: 1 C: 2 E: 2 Q: 0 G: 2 H: 0 I: 3 L: 3 K: 1 M: 0 F: 2 P: 3 S: 0 T: 1 W: 1 Y: 1 V: 0
Chemical Descriptors
31 reviewed residue count
C165H256N48O43S2 sequence-only estimate (linear, free termini)
3664.26 sequence-only estimate (linear, free termini)
9.06 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
2.08 sequence-only estimate (linear, free termini)
-0.397 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb