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Peptide record

TPDB11284

Antibacterial Antifungal standard
31 amino acids
Basic Information
3D PDB MODEL
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TPDB11284
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 31-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
GFGDSVKEGLKNAAVTILNKIKCKISECGGA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C136H232N38O43S2
RQHMPWY
GK
3151.69
9.02
5
3
11
+2
0.79
0.045
91.29
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
125
0.04
7
Residue Composition
number
3
A
0
R
2
N
1
D
2
C
2
E
0
Q
5
G
0
H
3
I
2
L
5
K
0
M
1
F
0
P
2
S
1
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 3 R: 0 N: 2 D: 1 C: 2 E: 2 Q: 0 G: 5 H: 0 I: 3 L: 2 K: 5 M: 0 F: 1 P: 0 S: 2 T: 1 W: 0 Y: 0 V: 2
Chemical Descriptors
31 reviewed residue count
C136H232N38O43S2 sequence-only estimate (linear, free termini)
3151.69 sequence-only estimate (linear, free termini)
9.02 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
0.79 sequence-only estimate (linear, free termini)
0.045 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept