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Peptide record

TPDB11212

Antibacterial Antifungal standard
30 amino acids
Basic Information
3D PDB MODEL
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TPDB11212
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 dbAMP Peptipedia AFP-GFuse Antifungipept CAFPdb
standard
No
A 30-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, dbAMP, Peptipedia, and other sources, with an available 3D structural model.
Sequence
AFFARLLASVRAAVKAFAKKPRLIGLSTLL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C153H258N42O34
NDCEQHMWY
A
3229.99
12.71
6
0
19
+6
0.19
0.907
133.67
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
7
A
3
R
0
N
0
D
0
C
0
E
0
Q
1
G
0
H
1
I
6
L
3
K
0
M
3
F
1
P
2
S
1
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 7 R: 3 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 1 L: 6 K: 3 M: 0 F: 3 P: 1 S: 2 T: 1 W: 0 Y: 0 V: 2
Chemical Descriptors
30 reviewed residue count
C153H258N42O34 sequence-only estimate (linear, free termini)
3229.99 sequence-only estimate (linear, free termini)
12.71 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
0.19 sequence-only estimate (linear, free termini)
0.907 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept