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Peptide record

TPDB11174

Antibacterial Antifungal standard
30 amino acids
Basic Information
3D PDB MODEL
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TPDB11174
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 30-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
GFFDRIKALTKNVTLELLNTITGKLPVTPP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C153H254N38O42
CQHMSWY
LT
3297.93
10.31
4
2
12
+2
0.70
0.150
113.67
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
7
Residue Composition
number
1
A
1
R
2
N
1
D
0
C
1
E
0
Q
2
G
0
H
2
I
5
L
3
K
0
M
2
F
3
P
0
S
5
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 1 R: 1 N: 2 D: 1 C: 0 E: 1 Q: 0 G: 2 H: 0 I: 2 L: 5 K: 3 M: 0 F: 2 P: 3 S: 0 T: 5 W: 0 Y: 0 V: 2
Chemical Descriptors
30 reviewed residue count
C153H254N38O42 sequence-only estimate (linear, free termini)
3297.93 sequence-only estimate (linear, free termini)
10.31 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
0.70 sequence-only estimate (linear, free termini)
0.150 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept