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Peptide record

TPDB11018

Antibacterial Antifungal standard
28 amino acids
Basic Information
3D PDB MODEL
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TPDB11018
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 28-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
GIFSVLNEVCKKNDYKPEICAHFSQNKP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C143H222N38O42S2
RMTW
K
3209.69
8.27
5
3
9
+1
1.70
-0.579
66.07
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
1615
0.50
9
Residue Composition
number
1
A
0
R
3
N
1
D
2
C
2
E
1
Q
1
G
1
H
2
I
1
L
4
K
0
M
2
F
2
P
2
S
0
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 1 R: 0 N: 3 D: 1 C: 2 E: 2 Q: 1 G: 1 H: 1 I: 2 L: 1 K: 4 M: 0 F: 2 P: 2 S: 2 T: 0 W: 0 Y: 1 V: 2
Chemical Descriptors
28 reviewed residue count
C143H222N38O42S2 sequence-only estimate (linear, free termini)
3209.69 sequence-only estimate (linear, free termini)
8.27 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.70 sequence-only estimate (linear, free termini)
-0.579 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb