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Peptide record

TPDB10975

Antibacterial Antifungal standard
27 amino acids
Basic Information
3D PDB MODEL
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TPDB10975
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 27-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
SRRRFDFSRRRIYVARRRSLAFAHRRR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C153H255N65O34
NCEQGKMPTW
R
3549.12
12.88
13
1
10
+11
6.46
-1.411
50.74
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
1490
0.42
4
Residue Composition
number
3
A
12
R
0
N
1
D
0
C
0
E
0
Q
0
G
1
H
1
I
1
L
0
K
0
M
3
F
0
P
3
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 3 R: 12 N: 0 D: 1 C: 0 E: 0 Q: 0 G: 0 H: 1 I: 1 L: 1 K: 0 M: 0 F: 3 P: 0 S: 3 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
27 reviewed residue count
C153H255N65O34 sequence-only estimate (linear, free termini)
3549.12 sequence-only estimate (linear, free termini)
12.88 sequence-only estimate (linear, free termini)
+11 sequence-only estimate (linear, free termini)
6.46 sequence-only estimate (linear, free termini)
-1.411 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb