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Peptide record

TPDB10848

Antibacterial Antifungal standard
26 amino acids
Basic Information
3D PDB MODEL
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TPDB10848
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia AFP-GFuse Antifungipept CAFPdb dbAMP
standard
No
A 26-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, AFP-GFuse, and other sources, with an available 3D structural model.
Sequence
GGYKNFYGSALRKGFYEGEAGRAIRR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C131H199N41O36
DCQHMPTWV
G
2924.27
10.46
6
2
10
+4
2.61
-0.927
41.54
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
4470
1.53
5
Residue Composition
number
3
A
4
R
1
N
0
D
0
C
2
E
0
Q
6
G
0
H
1
I
1
L
2
K
0
M
2
F
0
P
1
S
0
T
0
W
3
Y
0
V
Amino Acid Distribution
A: 3 R: 4 N: 1 D: 0 C: 0 E: 2 Q: 0 G: 6 H: 0 I: 1 L: 1 K: 2 M: 0 F: 2 P: 0 S: 1 T: 0 W: 0 Y: 3 V: 0
Chemical Descriptors
26 reviewed residue count
C131H199N41O36 sequence-only estimate (linear, free termini)
2924.27 sequence-only estimate (linear, free termini)
10.46 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.61 sequence-only estimate (linear, free termini)
-0.927 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept