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Peptide record

TPDB10260

Antibacterial Antifungal standard
24 amino acids
Basic Information
3D PDB MODEL
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TPDB10260
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 24-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
SWIKKDKFPSSTGPYNPNPPPPRF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C130H189N33O34
ACEQHLMV
P
2758.13
10.46
4
1
5
+3
2.18
-1.396
16.25
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
6990
2.53
7
Residue Composition
number
0
A
1
R
2
N
1
D
0
C
0
E
0
Q
1
G
0
H
1
I
0
L
3
K
0
M
2
F
7
P
3
S
1
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 2 D: 1 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 1 L: 0 K: 3 M: 0 F: 2 P: 7 S: 3 T: 1 W: 1 Y: 1 V: 0
Chemical Descriptors
24 reviewed residue count
C130H189N33O34 sequence-only estimate (linear, free termini)
2758.13 sequence-only estimate (linear, free termini)
10.46 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
2.18 sequence-only estimate (linear, free termini)
-1.396 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb