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Peptide record

TPDB10002

Antibacterial Antifungal standard
22 amino acids
Basic Information
3D PDB MODEL
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TPDB10002
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 22-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
SPYRCGSPDSRGSENTRCLIKK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C100H168N34O34S2
AQHMFWV
S
2454.76
9.70
5
2
3
+3
3.64
-1.259
35.45
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
1615
0.66
9
Residue Composition
number
0
A
3
R
1
N
1
D
2
C
1
E
0
Q
2
G
0
H
1
I
1
L
2
K
0
M
0
F
2
P
4
S
1
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 3 N: 1 D: 1 C: 2 E: 1 Q: 0 G: 2 H: 0 I: 1 L: 1 K: 2 M: 0 F: 0 P: 2 S: 4 T: 1 W: 0 Y: 1 V: 0
Chemical Descriptors
22 reviewed residue count
C100H168N34O34S2 sequence-only estimate (linear, free termini)
2454.76 sequence-only estimate (linear, free termini)
9.70 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
3.64 sequence-only estimate (linear, free termini)
-1.259 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb