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Peptide record

TPDB09887

Antibacterial standard
21 amino acids
Basic Information
3D PDB MODEL
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TPDB09887
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 21-aa standard natural antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
GAGIGPGHRRTWRRWPRRRWR
Physicochemical Analysis
C118H184N50O23
NDCEQLKMFSYV
R
2671.08
13.25
9
0
5
+8
2.49
-1.957
23.33
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
16500
617.73
1
Residue Composition
number
1
A
8
R
0
N
0
D
0
C
0
E
0
Q
4
G
1
H
1
I
0
L
0
K
0
M
0
F
2
P
0
S
1
T
3
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 8 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 4 H: 1 I: 1 L: 0 K: 0 M: 0 F: 0 P: 2 S: 0 T: 1 W: 3 Y: 0 V: 0
Chemical Descriptors
21
C118H184N50O23
2671.08
13.25
+8
2.49
-1.957
Evidence Records 2 records
Evidence 1 Activity

Activity

MIC
Antibacterial
8 µM

Target

Escherichia coli BL21

Source & Reference

NA

Other

Active against C. fangii, C. michiganesis ssp. michiganesis, B. subtilis 168, E. coli BL21 (MIC 8 uM), R. solanacearum, X. campestris pv. holcicola (MIC 4 uM), X. oryzae pv. oryzae, and P. sy
Evidence 2 Activity

Activity

MIC
Antibacterial
4 µM

Target

v. holcicola

Source & Reference

NA

Other

. michiganesis, B. subtilis 168, E. coli BL21 (MIC 8 uM), R. solanacearum, X. campestris pv. holcicola (MIC 4 uM), X. oryzae pv. oryzae, and P. syringae pv. tomato DC3000 (MIC < 4uM MBC 4 uM).