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Peptide record

TPDB09698

Antibacterial Antifungal standard
21 amino acids
Basic Information
3D PDB MODEL
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TPDB09698
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 21-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
SSMKLSFRARAYSFRGPGPQL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C105H166N32O28S1
NDCEHITWV
S
2356.73
12.12
4
0
8
+4
2.19
-0.510
46.67
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
1490
0.63
6
Residue Composition
number
2
A
3
R
0
N
0
D
0
C
0
E
1
Q
2
G
0
H
0
I
2
L
1
K
1
M
2
F
2
P
4
S
0
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 2 R: 3 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 2 H: 0 I: 0 L: 2 K: 1 M: 1 F: 2 P: 2 S: 4 T: 0 W: 0 Y: 1 V: 0
Chemical Descriptors
21 reviewed residue count
C105H166N32O28S1 sequence-only estimate (linear, free termini)
2356.73 sequence-only estimate (linear, free termini)
12.12 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.19 sequence-only estimate (linear, free termini)
-0.510 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept