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Peptide record

TPDB09658

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09658
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
GGHIRRIIRKIIHIIKKGGC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C101H182N36O21S1
ANDEQLMFPSTWYV
I
2268.84
12.14
8
0
7
+6
1.56
0.040
136.50
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
1
Residue Composition
number
0
A
3
R
0
N
0
D
1
C
0
E
0
Q
4
G
2
H
7
I
0
L
3
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 3 N: 0 D: 0 C: 1 E: 0 Q: 0 G: 4 H: 2 I: 7 L: 0 K: 3 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
20 reviewed residue count
C101H182N36O21S1 sequence-only estimate (linear, free termini)
2268.84 sequence-only estimate (linear, free termini)
12.14 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
1.56 sequence-only estimate (linear, free termini)
0.040 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA