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Peptide record

TPDB09637

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09637
Antibacterial
Anti-infective peptides
AntiBP3
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3, with an available 3D structural model.
Sequence
KCRRWQWRMKKLGAPSITCV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C108H179N35O24S3
NDEHFY
RK
2448.01
11.46
6
0
7
+6
2.34
-0.640
58.50
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
11125
4.54
5
Residue Composition
number
1
A
3
R
0
N
0
D
2
C
0
E
1
Q
1
G
0
H
1
I
1
L
3
K
1
M
0
F
1
P
1
S
1
T
2
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 3 N: 0 D: 0 C: 2 E: 0 Q: 1 G: 1 H: 0 I: 1 L: 1 K: 3 M: 1 F: 0 P: 1 S: 1 T: 1 W: 2 Y: 0 V: 1
Chemical Descriptors
20 reviewed residue count
C108H179N35O24S3 sequence-only estimate (linear, free termini)
2448.01 sequence-only estimate (linear, free termini)
11.46 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
2.34 sequence-only estimate (linear, free termini)
-0.640 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA