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Peptide record

TPDB09635

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09635
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
KLLSKAQEKFGKNKSRSFQL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C105H177N31O29
DCHIMPTWYV
K
2337.75
11.10
6
1
6
+5
2.70
-1.100
63.50
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
6
Residue Composition
number
1
A
1
R
1
N
0
D
0
C
1
E
2
Q
1
G
0
H
0
I
3
L
5
K
0
M
2
F
0
P
3
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 1 N: 1 D: 0 C: 0 E: 1 Q: 2 G: 1 H: 0 I: 0 L: 3 K: 5 M: 0 F: 2 P: 0 S: 3 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
20 reviewed residue count
C105H177N31O29 sequence-only estimate (linear, free termini)
2337.75 sequence-only estimate (linear, free termini)
11.10 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.70 sequence-only estimate (linear, free termini)
-1.100 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA