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Peptide record

TPDB09594

Antibacterial Antifungal standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09594
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb DRAMP dbAMP
standard
No
A 20-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
GKKLFVNVLDKIRCKVAGGC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C95H166N28O24S2
EQHMPSTWY
K
2148.66
10.17
5
1
8
+4
0.77
0.300
107.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
125
0.06
3
Residue Composition
number
1
A
1
R
1
N
1
D
2
C
0
E
0
Q
3
G
0
H
1
I
2
L
4
K
0
M
1
F
0
P
0
S
0
T
0
W
0
Y
3
V
Amino Acid Distribution
A: 1 R: 1 N: 1 D: 1 C: 2 E: 0 Q: 0 G: 3 H: 0 I: 1 L: 2 K: 4 M: 0 F: 1 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 3
Chemical Descriptors
20 reviewed residue count
C95H166N28O24S2 sequence-only estimate (linear, free termini)
2148.66 sequence-only estimate (linear, free termini)
10.17 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
0.77 sequence-only estimate (linear, free termini)
0.300 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept