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Peptide record

TPDB09506

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09506
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
EMIAAAIRAEKSRGGSSRQS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C84H149N31O30S1
NDCHLFPTWYV
AS
2105.36
11.22
4
2
7
+2
3.09
-0.690
59.00
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
0
0.00
5
Residue Composition
number
4
A
3
R
0
N
0
D
0
C
2
E
1
Q
2
G
0
H
2
I
0
L
1
K
1
M
0
F
0
P
4
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 4 R: 3 N: 0 D: 0 C: 0 E: 2 Q: 1 G: 2 H: 0 I: 2 L: 0 K: 1 M: 1 F: 0 P: 0 S: 4 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
20 reviewed residue count
C84H149N31O30S1 sequence-only estimate (linear, free termini)
2105.36 sequence-only estimate (linear, free termini)
11.22 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
3.09 sequence-only estimate (linear, free termini)
-0.690 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA