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Peptide record

TPDB09494

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09494
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
KFDPLEGAPMARGIVLEKVG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C96H159N25O27S1
NCQHSTWY
G
2127.53
7.10
3
3
9
+0
0.69
0.080
97.50
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
0
Residue Composition
number
2
A
1
R
0
N
1
D
0
C
2
E
0
Q
3
G
0
H
1
I
2
L
2
K
1
M
1
F
2
P
0
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 2 R: 1 N: 0 D: 1 C: 0 E: 2 Q: 0 G: 3 H: 0 I: 1 L: 2 K: 2 M: 1 F: 1 P: 2 S: 0 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
20 reviewed residue count
C96H159N25O27S1 sequence-only estimate (linear, free termini)
2127.53 sequence-only estimate (linear, free termini)
7.10 sequence-only estimate (linear, free termini)
+0 sequence-only estimate (linear, free termini)
0.69 sequence-only estimate (linear, free termini)
0.080 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA