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Peptide record

TPDB09490

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09490
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
HTGRSGPATGHSGHSSTHGS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C75H115N31O29
NDCEQILKMFWYV
GS
1914.93
11.05
5
0
1
+1
2.59
-1.260
5.00
Mammalian: 3.5 hour Yeast: 10 min E.coli: >10 hour
0
0.00
8
Residue Composition
number
1
A
1
R
0
N
0
D
0
C
0
E
0
Q
5
G
4
H
0
I
0
L
0
K
0
M
0
F
1
P
5
S
3
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 5 H: 4 I: 0 L: 0 K: 0 M: 0 F: 0 P: 1 S: 5 T: 3 W: 0 Y: 0 V: 0
Chemical Descriptors
20 reviewed residue count
C75H115N31O29 sequence-only estimate (linear, free termini)
1914.93 sequence-only estimate (linear, free termini)
11.05 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
2.59 sequence-only estimate (linear, free termini)
-1.260 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA