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Peptide record

TPDB09482

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09482
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
GLRKRLRKPRNKPKEKLKKI
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C111H208N40O24
ADCQHMFSTWYV
K
2487.13
12.44
11
1
4
+10
4.57
-2.000
78.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
1
Residue Composition
number
0
A
4
R
1
N
0
D
0
C
1
E
0
Q
1
G
0
H
1
I
3
L
7
K
0
M
0
F
2
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 4 N: 1 D: 0 C: 0 E: 1 Q: 0 G: 1 H: 0 I: 1 L: 3 K: 7 M: 0 F: 0 P: 2 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
20 reviewed residue count
C111H208N40O24 sequence-only estimate (linear, free termini)
2487.13 sequence-only estimate (linear, free termini)
12.44 sequence-only estimate (linear, free termini)
+10 sequence-only estimate (linear, free termini)
4.57 sequence-only estimate (linear, free termini)
-2.000 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA