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Peptide record

TPDB09414

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09414
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
LEGRSISRIDELIQQRQEKD
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C100H173N33O36
ANCHMFPTWYV
REQI
2413.67
4.72
4
5
5
-1
4.30
-1.315
97.50
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
0
0.00
5
Residue Composition
number
0
A
3
R
0
N
2
D
0
C
3
E
3
Q
1
G
0
H
3
I
2
L
1
K
0
M
0
F
0
P
2
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 3 N: 0 D: 2 C: 0 E: 3 Q: 3 G: 1 H: 0 I: 3 L: 2 K: 1 M: 0 F: 0 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
20 reviewed residue count
C100H173N33O36 sequence-only estimate (linear, free termini)
2413.67 sequence-only estimate (linear, free termini)
4.72 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
4.30 sequence-only estimate (linear, free termini)
-1.315 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA