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Peptide record

TPDB09411

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09411
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
KWWVFRVVYPRIVYRRVRWK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C138H206N40O23
ANDCEQGHLMST
RV
2793.41
12.24
7
0
12
+7
2.54
-0.445
92.00
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
19480
6.97
2
Residue Composition
number
0
A
5
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
0
L
2
K
0
M
1
F
1
P
0
S
0
T
3
W
2
Y
5
V
Amino Acid Distribution
A: 0 R: 5 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 0 K: 2 M: 0 F: 1 P: 1 S: 0 T: 0 W: 3 Y: 2 V: 5
Chemical Descriptors
20 reviewed residue count
C138H206N40O23 sequence-only estimate (linear, free termini)
2793.41 sequence-only estimate (linear, free termini)
12.24 sequence-only estimate (linear, free termini)
+7 sequence-only estimate (linear, free termini)
2.54 sequence-only estimate (linear, free termini)
-0.445 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA