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Peptide record

TPDB09394

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09394
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
KIVKVITVKSISPASLVPVF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C102H177N23O25
RNDCEQGHMWY
V
2125.67
10.84
3
0
11
+3
-0.76
1.245
155.50
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
4
Residue Composition
number
1
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
3
I
1
L
3
K
0
M
1
F
2
P
3
S
1
T
0
W
0
Y
5
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 3 L: 1 K: 3 M: 0 F: 1 P: 2 S: 3 T: 1 W: 0 Y: 0 V: 5
Chemical Descriptors
20 reviewed residue count
C102H177N23O25 sequence-only estimate (linear, free termini)
2125.67 sequence-only estimate (linear, free termini)
10.84 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
-0.76 sequence-only estimate (linear, free termini)
1.245 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA