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Peptide record

TPDB09391

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09391
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
WSGIRGYKGGYKGLFKQTNY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C109H159N29O28
ADCEHMPV
G
2323.64
10.34
4
0
7
+4
1.51
-1.020
39.00
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
9970
4.29
7
Residue Composition
number
0
A
1
R
1
N
0
D
0
C
0
E
1
Q
5
G
0
H
1
I
1
L
3
K
0
M
1
F
0
P
1
S
1
T
1
W
3
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 1 D: 0 C: 0 E: 0 Q: 1 G: 5 H: 0 I: 1 L: 1 K: 3 M: 0 F: 1 P: 0 S: 1 T: 1 W: 1 Y: 3 V: 0
Chemical Descriptors
20 reviewed residue count
C109H159N29O28 sequence-only estimate (linear, free termini)
2323.64 sequence-only estimate (linear, free termini)
10.34 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.51 sequence-only estimate (linear, free termini)
-1.020 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA