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Peptide record

TPDB09364

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09364
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
SVKVAKSVIPSAVFAGGKVF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C94H155N23O24
RNDCEQHLMTWY
V
1991.40
10.84
3
0
11
+3
-0.58
1.000
107.00
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
3
A
0
R
0
N
0
D
0
C
0
E
0
Q
2
G
0
H
1
I
0
L
3
K
0
M
2
F
1
P
3
S
0
T
0
W
0
Y
5
V
Amino Acid Distribution
A: 3 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 1 L: 0 K: 3 M: 0 F: 2 P: 1 S: 3 T: 0 W: 0 Y: 0 V: 5
Chemical Descriptors
20 reviewed residue count
C94H155N23O24 sequence-only estimate (linear, free termini)
1991.40 sequence-only estimate (linear, free termini)
10.84 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
-0.58 sequence-only estimate (linear, free termini)
1.000 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA