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Peptide record

TPDB09356

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09356
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
SFVFKLASKVVPSVFSALTR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C104H167N25O26
NDCEQGHIMWY
SV
2183.62
11.64
3
0
11
+3
0.18
0.930
107.00
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
5
Residue Composition
number
2
A
1
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
2
L
2
K
0
M
3
F
1
P
4
S
1
T
0
W
0
Y
4
V
Amino Acid Distribution
A: 2 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 2 K: 2 M: 0 F: 3 P: 1 S: 4 T: 1 W: 0 Y: 0 V: 4
Chemical Descriptors
20 reviewed residue count
C104H167N25O26 sequence-only estimate (linear, free termini)
2183.62 sequence-only estimate (linear, free termini)
11.64 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.18 sequence-only estimate (linear, free termini)
0.930 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA