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Peptide record

TPDB09311

Antibacterial Antifungal standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09311
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 dbAMP Peptipedia Antifungipept CAFPdb
standard
No
A 20-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, dbAMP, Peptipedia, and other sources, with an available 3D structural model.
Sequence
LPKMSTKLRVPYRRGTKDYH
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C109H180N34O28S1
ANCEQIFW
RK
2446.90
10.94
7
1
6
+5
3.32
-1.330
53.50
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
2980
1.22
5
Residue Composition
number
0
A
3
R
0
N
1
D
0
C
0
E
0
Q
1
G
1
H
0
I
2
L
3
K
1
M
0
F
2
P
1
S
2
T
0
W
2
Y
1
V
Amino Acid Distribution
A: 0 R: 3 N: 0 D: 1 C: 0 E: 0 Q: 0 G: 1 H: 1 I: 0 L: 2 K: 3 M: 1 F: 0 P: 2 S: 1 T: 2 W: 0 Y: 2 V: 1
Chemical Descriptors
20 reviewed residue count
C109H180N34O28S1 sequence-only estimate (linear, free termini)
2446.90 sequence-only estimate (linear, free termini)
10.94 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
3.32 sequence-only estimate (linear, free termini)
-1.330 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept