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Peptide record

TPDB09284

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09284
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
FLGVVFKSASKVFPAVFGKV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C106H163N23O23
RNDCEQHIMTWY
V
2127.60
10.84
3
0
12
+3
-0.95
1.195
102.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
0
0.00
2
Residue Composition
number
2
A
0
R
0
N
0
D
0
C
0
E
0
Q
2
G
0
H
0
I
1
L
3
K
0
M
4
F
1
P
2
S
0
T
0
W
0
Y
5
V
Amino Acid Distribution
A: 2 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 0 L: 1 K: 3 M: 0 F: 4 P: 1 S: 2 T: 0 W: 0 Y: 0 V: 5
Chemical Descriptors
20 reviewed residue count
C106H163N23O23 sequence-only estimate (linear, free termini)
2127.60 sequence-only estimate (linear, free termini)
10.84 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
-0.95 sequence-only estimate (linear, free termini)
1.195 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA