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Peptide record

TPDB09266

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB09266
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
LYSPTCVKAAVSRFIGKVSA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C95H157N25O26S1
NDEQHMW
ASV
2097.50
10.20
3
0
10
+3
0.32
0.645
97.50
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
1490
0.71
6
Residue Composition
number
3
A
1
R
0
N
0
D
1
C
0
E
0
Q
1
G
0
H
1
I
1
L
2
K
0
M
1
F
1
P
3
S
1
T
0
W
1
Y
3
V
Amino Acid Distribution
A: 3 R: 1 N: 0 D: 0 C: 1 E: 0 Q: 0 G: 1 H: 0 I: 1 L: 1 K: 2 M: 0 F: 1 P: 1 S: 3 T: 1 W: 0 Y: 1 V: 3
Chemical Descriptors
20 reviewed residue count
C95H157N25O26S1 sequence-only estimate (linear, free termini)
2097.50 sequence-only estimate (linear, free termini)
10.20 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.32 sequence-only estimate (linear, free termini)
0.645 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA