Back to search

Peptide record

TPDB09265

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB09265
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
LAKRRVLTLLRQLRRVSPSS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C102H189N37O26
NDCEGHIMFWY
RL
2349.86
13.00
6
0
8
+6
3.20
-0.270
131.50
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
0
0.00
5
Residue Composition
number
1
A
5
R
0
N
0
D
0
C
0
E
1
Q
0
G
0
H
0
I
5
L
1
K
0
M
0
F
1
P
3
S
1
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 1 R: 5 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 0 H: 0 I: 0 L: 5 K: 1 M: 0 F: 0 P: 1 S: 3 T: 1 W: 0 Y: 0 V: 2
Chemical Descriptors
20 reviewed residue count
C102H189N37O26 sequence-only estimate (linear, free termini)
2349.86 sequence-only estimate (linear, free termini)
13.00 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
3.20 sequence-only estimate (linear, free termini)
-0.270 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA