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Peptide record

TPDB09145

Antibacterial standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB09145
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 19-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
GNNKPVYIPRPRPPHPRLV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C101H163N33O23
ADCEQMFSTW
P
2207.61
12.12
5
0
5
+4
2.61
-1.168
71.58
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
1490
0.67
3
Residue Composition
number
0
A
3
R
2
N
0
D
0
C
0
E
0
Q
1
G
1
H
1
I
1
L
1
K
0
M
0
F
6
P
0
S
0
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 0 R: 3 N: 2 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 1 I: 1 L: 1 K: 1 M: 0 F: 0 P: 6 S: 0 T: 0 W: 0 Y: 1 V: 2
Chemical Descriptors
19 reviewed residue count
C101H163N33O23 sequence-only estimate (linear, free termini)
2207.61 sequence-only estimate (linear, free termini)
12.12 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.61 sequence-only estimate (linear, free termini)
-1.168 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA