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Peptide record

TPDB09126

Antibacterial standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB09126
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 19-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
FFGLHNLVPSMLCVVRKKC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C100H163N27O22S3
ADEQITWY
LV
2191.74
9.92
4
0
9
+3
0.11
0.774
107.37
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
125
0.06
4
Residue Composition
number
0
A
1
R
1
N
0
D
2
C
0
E
0
Q
1
G
1
H
0
I
3
L
2
K
1
M
2
F
1
P
1
S
0
T
0
W
0
Y
3
V
Amino Acid Distribution
A: 0 R: 1 N: 1 D: 0 C: 2 E: 0 Q: 0 G: 1 H: 1 I: 0 L: 3 K: 2 M: 1 F: 2 P: 1 S: 1 T: 0 W: 0 Y: 0 V: 3
Chemical Descriptors
19 reviewed residue count
C100H163N27O22S3 sequence-only estimate (linear, free termini)
2191.74 sequence-only estimate (linear, free termini)
9.92 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.11 sequence-only estimate (linear, free termini)
0.774 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA