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Peptide record

TPDB09116

Antibacterial standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB09116
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 19-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
GRRYKKFRWKFKGRWFWFG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C132H182N38O21
ANDCEQHILMPSTV
RKF
2637.14
12.42
8
0
8
+8
3.17
-1.453
0.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
17990
6.82
1
Residue Composition
number
0
A
4
R
0
N
0
D
0
C
0
E
0
Q
3
G
0
H
0
I
0
L
4
K
0
M
4
F
0
P
0
S
0
T
3
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 4 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 3 H: 0 I: 0 L: 0 K: 4 M: 0 F: 4 P: 0 S: 0 T: 0 W: 3 Y: 1 V: 0
Chemical Descriptors
19 reviewed residue count
C132H182N38O21 sequence-only estimate (linear, free termini)
2637.14 sequence-only estimate (linear, free termini)
12.42 sequence-only estimate (linear, free termini)
+8 sequence-only estimate (linear, free termini)
3.17 sequence-only estimate (linear, free termini)
-1.453 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA