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Peptide record

TPDB09102

Antibacterial standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB09102
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 19-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
FWRRIRVTPVVNPPFLQQT
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C111H172N32O25
ADCEGHKMSY
RPV
2354.79
12.70
3
0
8
+3
1.97
-0.242
86.84
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
5500
2.34
5
Residue Composition
number
0
A
3
R
1
N
0
D
0
C
0
E
2
Q
0
G
0
H
1
I
1
L
0
K
0
M
2
F
3
P
0
S
2
T
1
W
0
Y
3
V
Amino Acid Distribution
A: 0 R: 3 N: 1 D: 0 C: 0 E: 0 Q: 2 G: 0 H: 0 I: 1 L: 1 K: 0 M: 0 F: 2 P: 3 S: 0 T: 2 W: 1 Y: 0 V: 3
Chemical Descriptors
19 reviewed residue count
C111H172N32O25 sequence-only estimate (linear, free termini)
2354.79 sequence-only estimate (linear, free termini)
12.70 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
1.97 sequence-only estimate (linear, free termini)
-0.242 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA