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Peptide record

TPDB09087

Antibacterial standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB09087
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 19-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
RWRWRWFSATFIKHFIHRF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C133H181N39O22
NDCEQGLMPYV
RF
2678.15
12.88
7
0
10
+5
2.63
-0.553
46.32
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
16500
6.16
2
Residue Composition
number
1
A
4
R
0
N
0
D
0
C
0
E
0
Q
0
G
2
H
2
I
0
L
1
K
0
M
4
F
0
P
1
S
1
T
3
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 4 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 2 I: 2 L: 0 K: 1 M: 0 F: 4 P: 0 S: 1 T: 1 W: 3 Y: 0 V: 0
Chemical Descriptors
19 reviewed residue count
C133H181N39O22 sequence-only estimate (linear, free termini)
2678.15 sequence-only estimate (linear, free termini)
12.88 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.63 sequence-only estimate (linear, free termini)
-0.553 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA