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Peptide record

TPDB09072

Antibacterial standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB09072
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 19-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
FWRRIRVTPVVNPWFLQQT
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C117H175N33O25
ADCEGHKMSY
RV
2443.88
12.70
3
0
9
+3
1.84
-0.205
86.84
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
11000
4.50
5
Residue Composition
number
0
A
3
R
1
N
0
D
0
C
0
E
2
Q
0
G
0
H
1
I
1
L
0
K
0
M
2
F
2
P
0
S
2
T
2
W
0
Y
3
V
Amino Acid Distribution
A: 0 R: 3 N: 1 D: 0 C: 0 E: 0 Q: 2 G: 0 H: 0 I: 1 L: 1 K: 0 M: 0 F: 2 P: 2 S: 0 T: 2 W: 2 Y: 0 V: 3
Chemical Descriptors
19 reviewed residue count
C117H175N33O25 sequence-only estimate (linear, free termini)
2443.88 sequence-only estimate (linear, free termini)
12.70 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
1.84 sequence-only estimate (linear, free termini)
-0.205 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA