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Peptide record

TPDB09052

Antibacterial Antifungal standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB09052
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 19-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
SGRGKQGGKVRAKAKTRSS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C79H147N33O25
NDCEHILMFPWY
GK
1959.24
12.72
7
0
3
+7
3.89
-1.553
25.79
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
5
Residue Composition
number
2
A
3
R
0
N
0
D
0
C
0
E
1
Q
4
G
0
H
0
I
0
L
4
K
0
M
0
F
0
P
3
S
1
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 2 R: 3 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 4 H: 0 I: 0 L: 0 K: 4 M: 0 F: 0 P: 0 S: 3 T: 1 W: 0 Y: 0 V: 1
Chemical Descriptors
19 reviewed residue count
C79H147N33O25 sequence-only estimate (linear, free termini)
1959.24 sequence-only estimate (linear, free termini)
12.72 sequence-only estimate (linear, free termini)
+7 sequence-only estimate (linear, free termini)
3.89 sequence-only estimate (linear, free termini)
-1.553 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept