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Peptide record

TPDB09020

Antibacterial Antifungal standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB09020
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 18-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
VLSAFHKVIKIIHHISHF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C103H160N28O21
RNDCEQGMPTWY
HI
2126.58
10.60
6
0
10
+2
-0.22
0.856
146.11
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
2
Residue Composition
number
1
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
4
H
4
I
1
L
2
K
0
M
2
F
0
P
2
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 4 I: 4 L: 1 K: 2 M: 0 F: 2 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
18 reviewed residue count
C103H160N28O21 sequence-only estimate (linear, free termini)
2126.58 sequence-only estimate (linear, free termini)
10.60 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
-0.22 sequence-only estimate (linear, free termini)
0.856 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept