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Peptide record

TPDB09006

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB09006
Antibacterial
Anti-infective peptides
AntiBP3 dbAMP DRAMP Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from AntiBP3, dbAMP, DRAMP, and other sources, with an available 3D structural model.
Sequence
ESLKARSLKKSLKLKKLL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C95H179N27O24
NDCQGHIMFPTWYV
LK
2083.63
11.19
7
1
7
+6
1.88
-0.511
135.56
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
0
0.00
3
Residue Composition
number
1
A
1
R
0
N
0
D
0
C
1
E
0
Q
0
G
0
H
0
I
6
L
6
K
0
M
0
F
0
P
3
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 1 N: 0 D: 0 C: 0 E: 1 Q: 0 G: 0 H: 0 I: 0 L: 6 K: 6 M: 0 F: 0 P: 0 S: 3 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
18 reviewed residue count
C95H179N27O24 sequence-only estimate (linear, free termini)
2083.63 sequence-only estimate (linear, free termini)
11.19 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
1.88 sequence-only estimate (linear, free termini)
-0.511 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.