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Peptide record

TPDB08866

Antibacterial Antifungal standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB08866
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 18-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
AFTRRRSYSTEYSYGTTV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C94H141N27O31
NDCQHILKMPW
T
2145.32
9.97
3
1
6
+2
3.48
-0.983
21.67
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
4470
2.08
10
Residue Composition
number
1
A
3
R
0
N
0
D
0
C
1
E
0
Q
1
G
0
H
0
I
0
L
0
K
0
M
1
F
0
P
3
S
4
T
0
W
3
Y
1
V
Amino Acid Distribution
A: 1 R: 3 N: 0 D: 0 C: 0 E: 1 Q: 0 G: 1 H: 0 I: 0 L: 0 K: 0 M: 0 F: 1 P: 0 S: 3 T: 4 W: 0 Y: 3 V: 1
Chemical Descriptors
18 reviewed residue count
C94H141N27O31 sequence-only estimate (linear, free termini)
2145.32 sequence-only estimate (linear, free termini)
9.97 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
3.48 sequence-only estimate (linear, free termini)
-0.983 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept