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Peptide record

TPDB08859

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB08859
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
ECKFTVKPYLKRFQVYCP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C106H161N25O25S2
ANDGHIMSW
K
2249.72
9.52
4
1
7
+3
1.40
-0.383
53.89
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
3105
1.38
6
Residue Composition
number
0
A
1
R
0
N
0
D
2
C
1
E
1
Q
0
G
0
H
0
I
1
L
3
K
0
M
2
F
2
P
0
S
1
T
0
W
2
Y
2
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 2 E: 1 Q: 1 G: 0 H: 0 I: 0 L: 1 K: 3 M: 0 F: 2 P: 2 S: 0 T: 1 W: 0 Y: 2 V: 2
Chemical Descriptors
18 reviewed residue count
C106H161N25O25S2 sequence-only estimate (linear, free termini)
2249.72 sequence-only estimate (linear, free termini)
9.52 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
1.40 sequence-only estimate (linear, free termini)
-0.383 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA