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Peptide record

TPDB08771

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB08771
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
RNPRPVYIPQPRPPHPRL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C100H160N34O22
ADCEGKMFSTW
P
2190.59
12.40
5
0
4
+4
3.49
-1.567
59.44
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
1490
0.68
3
Residue Composition
number
0
A
4
R
1
N
0
D
0
C
0
E
1
Q
0
G
1
H
1
I
1
L
0
K
0
M
0
F
7
P
0
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 4 N: 1 D: 0 C: 0 E: 0 Q: 1 G: 0 H: 1 I: 1 L: 1 K: 0 M: 0 F: 0 P: 7 S: 0 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
18 reviewed residue count
C100H160N34O22 sequence-only estimate (linear, free termini)
2190.59 sequence-only estimate (linear, free termini)
12.40 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
3.49 sequence-only estimate (linear, free termini)
-1.567 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA