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Peptide record

TPDB08732

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB08732
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
SVIGCWTKSIPPRPCFVK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C93H148N24O22S2
ANDEQHLMY
P
2018.47
9.92
3
0
6
+3
0.48
0.250
75.56
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
5625
2.79
5
Residue Composition
number
0
A
1
R
0
N
0
D
2
C
0
E
0
Q
1
G
0
H
2
I
0
L
2
K
0
M
1
F
3
P
2
S
1
T
1
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 2 E: 0 Q: 0 G: 1 H: 0 I: 2 L: 0 K: 2 M: 0 F: 1 P: 3 S: 2 T: 1 W: 1 Y: 0 V: 2
Chemical Descriptors
18 reviewed residue count
C93H148N24O22S2 sequence-only estimate (linear, free termini)
2018.47 sequence-only estimate (linear, free termini)
9.92 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.48 sequence-only estimate (linear, free termini)
0.250 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA