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Peptide record

TPDB08696

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB08696
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
GKPRPYSPRPTSHPRPIR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C93H151N33O23
ANDCEQLMFWV
P
2099.43
12.41
6
0
2
+5
4.09
-1.900
21.67
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
1490
0.71
4
Residue Composition
number
0
A
4
R
0
N
0
D
0
C
0
E
0
Q
1
G
1
H
1
I
0
L
1
K
0
M
0
F
6
P
2
S
1
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 4 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 1 I: 1 L: 0 K: 1 M: 0 F: 0 P: 6 S: 2 T: 1 W: 0 Y: 1 V: 0
Chemical Descriptors
18 reviewed residue count
C93H151N33O23 sequence-only estimate (linear, free termini)
2099.43 sequence-only estimate (linear, free termini)
12.41 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
4.09 sequence-only estimate (linear, free termini)
-1.900 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA