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Peptide record

TPDB08603

Antibacterial Antifungal standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB08603
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia CAFPdb dbAMP
standard
No
A 17-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, CAFPdb, and other sources, with an available 3D structural model.
Sequence
AAIYPFGIKIRCKAAFC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C88H138N22O19S2
NDEQHLMSTWV
A
1872.32
9.70
3
0
10
+3
-0.31
0.924
92.35
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
1615
0.86
3
Residue Composition
number
4
A
1
R
0
N
0
D
2
C
0
E
0
Q
1
G
0
H
3
I
0
L
2
K
0
M
2
F
1
P
0
S
0
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 4 R: 1 N: 0 D: 0 C: 2 E: 0 Q: 0 G: 1 H: 0 I: 3 L: 0 K: 2 M: 0 F: 2 P: 1 S: 0 T: 0 W: 0 Y: 1 V: 0
Chemical Descriptors
17 reviewed residue count
C88H138N22O19S2 sequence-only estimate (linear, free termini)
1872.32 sequence-only estimate (linear, free termini)
9.70 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
-0.31 sequence-only estimate (linear, free termini)
0.924 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb