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Peptide record

TPDB08523

Antibacterial standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB08523
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 17-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
LRVRLASHLRKLRKRLL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C95H178N36O19
NDCEQGIMFPTWY
L
2128.69
13.01
8
0
8
+7
3.43
-0.324
160.59
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
0
0.00
1
Residue Composition
number
1
A
5
R
0
N
0
D
0
C
0
E
0
Q
0
G
1
H
0
I
6
L
2
K
0
M
0
F
0
P
1
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 5 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 1 I: 0 L: 6 K: 2 M: 0 F: 0 P: 0 S: 1 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
17 reviewed residue count
C95H178N36O19 sequence-only estimate (linear, free termini)
2128.69 sequence-only estimate (linear, free termini)
13.01 sequence-only estimate (linear, free termini)
+7 sequence-only estimate (linear, free termini)
3.43 sequence-only estimate (linear, free termini)
-0.324 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA