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Peptide record

TPDB08438

Antibacterial standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB08438
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 17-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
WLNALLHHGLNCAKGVL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C85H135N25O20S1
RDEQIMFPSTY
L
1859.22
8.97
3
0
9
+1
-0.56
0.606
143.53
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
5500
2.96
3
Residue Composition
number
2
A
0
R
2
N
0
D
1
C
0
E
0
Q
2
G
2
H
0
I
5
L
1
K
0
M
0
F
0
P
0
S
0
T
1
W
0
Y
1
V
Amino Acid Distribution
A: 2 R: 0 N: 2 D: 0 C: 1 E: 0 Q: 0 G: 2 H: 2 I: 0 L: 5 K: 1 M: 0 F: 0 P: 0 S: 0 T: 0 W: 1 Y: 0 V: 1
Chemical Descriptors
17 reviewed residue count
C85H135N25O20S1 sequence-only estimate (linear, free termini)
1859.22 sequence-only estimate (linear, free termini)
8.97 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-0.56 sequence-only estimate (linear, free termini)
0.606 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA