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Peptide record

TPDB08426

Antibacterial standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB08426
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 17-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
WIVYKWPRKKVRYWTGP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C113H163N29O21
ANDCEQHLMFS
KW
2263.72
10.95
5
0
8
+5
1.67
-1.024
57.06
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
19480
8.61
3
Residue Composition
number
0
A
2
R
0
N
0
D
0
C
0
E
0
Q
1
G
0
H
1
I
0
L
3
K
0
M
0
F
2
P
0
S
1
T
3
W
2
Y
2
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 1 L: 0 K: 3 M: 0 F: 0 P: 2 S: 0 T: 1 W: 3 Y: 2 V: 2
Chemical Descriptors
17 reviewed residue count
C113H163N29O21 sequence-only estimate (linear, free termini)
2263.72 sequence-only estimate (linear, free termini)
10.95 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
1.67 sequence-only estimate (linear, free termini)
-1.024 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA