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Peptide record

TPDB08422

Antibacterial standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB08422
Antibacterial
Anti-infective peptides
AntiBP3 Peptipedia
standard
No
A 17-aa standard-residue antibacterial peptide sequence curated from AntiBP3 and Peptipedia, with an available 3D structural model.
Sequence
NNRPVYIPQPRPPHPRI
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C93H147N31O22
ADCEGLKMFSTW
P
2051.38
12.11
4
0
4
+3
3.21
-1.465
62.94
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
1490
0.73
4
Residue Composition
number
0
A
3
R
2
N
0
D
0
C
0
E
1
Q
0
G
1
H
2
I
0
L
0
K
0
M
0
F
6
P
0
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 3 N: 2 D: 0 C: 0 E: 0 Q: 1 G: 0 H: 1 I: 2 L: 0 K: 0 M: 0 F: 0 P: 6 S: 0 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
17 reviewed residue count
C93H147N31O22 sequence-only estimate (linear, free termini)
2051.38 sequence-only estimate (linear, free termini)
12.11 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
3.21 sequence-only estimate (linear, free termini)
-1.465 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA