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Peptide record

TPDB08419

Antibacterial Antifungal standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB08419
Antibacterial Antifungal
Anti-infective peptides
AntiBP3 Peptipedia Antifungipept CAFPdb dbAMP
standard
No
A 17-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from AntiBP3, Peptipedia, Antifungipept, and other sources, with an available 3D structural model.
Sequence
LKGCWTKSIPPKPCFGK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C88H140N22O20S2
ARNDEQHMYV
K
1890.34
10.17
4
0
4
+4
0.50
-0.441
45.88
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
5625
2.98
4
Residue Composition
number
0
A
0
R
0
N
0
D
2
C
0
E
0
Q
2
G
0
H
1
I
1
L
4
K
0
M
1
F
3
P
1
S
1
T
1
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 2 E: 0 Q: 0 G: 2 H: 0 I: 1 L: 1 K: 4 M: 0 F: 1 P: 3 S: 1 T: 1 W: 1 Y: 0 V: 0
Chemical Descriptors
17 reviewed residue count
C88H140N22O20S2 sequence-only estimate (linear, free termini)
1890.34 sequence-only estimate (linear, free termini)
10.17 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
0.50 sequence-only estimate (linear, free termini)
-0.441 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept